刘凡
9ff4d1d109
add S3,archive,truncate
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2 年之前 | |
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| .. | ||
| README.md | 2 年之前 | |
| truncate_at_first_N.py | 2 年之前 | |
README.md
truncate_FASTQ_at_first_N
Python script to truncate the reads in a gzip-ed FASTQ file at the first instance of an 'N' in the sequence.
The script has two required parameters: -i and -o.
-i is the compressed (fq.gz) input FASTQ format file that you want to truncate.
-o is the output directory where you would like the truncated FASTQ file to be written.
Example:
./truncate_at_first_N.py -i input_file.fastq.gz -o output_dir/